Gene: MT8G030550 (Medicago truncatula)

Overview top

Gene Identifier
MT8G030550
Transcript Identifier
MT8G030550.1
Gene Type
Coding gene
Location
chr8 : 11268197-11279019 : negative

Family

Gene family
HOM03D000113
(850 genes in 31 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
ATP-dependent helicase BRM
Description (AnnoMine)
CHD3-type chromatin-remodeling factor PICKLE

Identifiers

Identifier Name
pidMedtr8g030550.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0043044ISOPLAZA Integrative OrthologyATP-dependent chromatin remodelingAT2G46020
GO:0040029ISOPLAZA Integrative Orthologyregulation of gene expression, epigeneticAT2G46020
GO:0010199ISOPLAZA Integrative Orthologyorgan boundary specification between lateral organs and the meristemAT2G46020

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0004386IEAInterProhelicase activity
GO:0016818IEAInterProhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676IEAInterPronucleic acid binding
GO:0003677IEAInterProDNA binding
GO:0005524IEAInterProATP binding
GO:0003682ISOPLAZA Integrative Orthologychromatin bindingAT2G46020
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03D000113
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03D000113
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03D000113
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000113
GO:0043167IEAPLAZA Homologyion bindingHOM03D000113
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03D000113
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03D000113
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03D000113
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D000113
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03D000113
GO:0000166IEAPLAZA Homologynucleotide bindingHOM03D000113
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03D000113
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03D000113
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000113
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03D000113
GO:0017111IEAPLAZA Homologynucleoside-triphosphatase activityHOM03D000113
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03D000113
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03D000113
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000113
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000113
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03D000113
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03D000113

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0005829ISOPLAZA Integrative OrthologycytosolAT2G46020

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR001487Bromodomain
IPR014978Glutamine-Leucine-Glutamine, QLQ
IPR000330SNF2-related
IPR001650Helicase, C-terminal

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.