Gene: ME09980G00040 (Manihot esculenta)

Overview top

Gene Identifier
ME09980G00040
Transcript Identifier
ME09980G00040.1
Gene Type
Coding gene
Location
scaffold09980 : 51790-57005 : negative

Family

Gene family
HOM03D000967
(153 genes in 29 species)
specific family
Subfamily
ORTHO03D001503
(49 genes in 23 species)
specific family

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Descriptions

Description (AnnoMine)
Glutamate decarboxylase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
RNAnamecassava4.1_006126m
PACid17983492

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006536IEAInterProglutamate metabolic process
GO:0019752IEAInterProcarboxylic acid metabolic process
GO:0009448ISOPLAZA Integrative Orthologygamma-aminobutyric acid metabolic processSL03G098240
GO:0043648IEAPLAZA Homologydicarboxylic acid metabolic processHOM03D000967
GO:0009064IEAPLAZA Homologyglutamine family amino acid metabolic processHOM03D000967

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004351IEAInterProglutamate decarboxylase activity
GO:0030170IEAInterPropyridoxal phosphate binding
GO:0016831IEAInterProcarboxy-lyase activity
GO:0003824IEAInterProcatalytic activity
GO:0016830IEAPLAZA Homologycarbon-carbon lyase activityHOM03D000967

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT3G17760

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR010107Glutamate decarboxylase
IPR015424Pyridoxal phosphate-dependent transferase
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR002129Pyridoxal phosphate-dependent decarboxylase

Mapman id Description
13.1.1.1.1amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase
No SignalP domains detected for this gene.