Gene: ME09381G00010 (Manihot esculenta)
Overview 
- Gene Identifier
- ME09381G00010
- Transcript Identifier
- ME09381G00010.1
- Gene Type
- Coding gene
- Location
- scaffold09381 : 4606-5088 : negative
Family
- Gene family
- Subfamily
Descriptions
- Description (AnnoMine)
-
protein ligase RNF181
Description of best ortholog(s):

Identifiers
Identifier | Name |
---|---|
RNAname | cassava4.1_032983m |
PACid | 17967656 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding | |
GO:0008270 | IEA | InterPro | zinc ion binding | |
GO:0043169 | IEA | PLAZA Homology | cation binding | HOM03D000067 |
GO:0005488 | IEA | PLAZA Homology | binding | HOM03D000067 |
GO:0043167 | IEA | PLAZA Homology | ion binding | HOM03D000067 |
GO:0046914 | IEA | PLAZA Homology | transition metal ion binding | HOM03D000067 |
GO:0046872 | IEA | PLAZA Homology | metal ion binding | HOM03D000067 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
29.5.11.4.2 | protein.degradation.ubiquitin.E3.RING |
No SignalP domains detected for this gene.