Gene: ME04209G00430 (Manihot esculenta)

Overview top

Gene Identifier
ME04209G00430
Transcript Identifier
ME04209G00430.1
Gene Type
Coding gene
Location
scaffold04209 : 434697-435851 : positive

Family

Gene family
HOM03D000425
(295 genes in 29 species)
specific family
Subfamily
ORTHO03D003865
(37 genes in 25 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Two-component response regulator
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
RNAnamecassava4.1_026975m
PACid17993634

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0000160IEAInterProphosphorelay signal transduction system
GO:0009735ISOPLAZA Integrative Orthologyresponse to cytokininAT1G59940 AT1G10470
GO:0007623ISOPLAZA Integrative Orthologycircadian rhythmAT1G59940 AT1G10470
GO:0042752ISOPLAZA Integrative Orthologyregulation of circadian rhythmAT1G59940 AT1G10470
GO:0010161ISOPLAZA Integrative Orthologyred light signaling pathwayAT1G59940
GO:0010114ISOPLAZA Integrative Orthologyresponse to red lightAT1G59940 AT1G10470
GO:0009736ISOPLAZA Integrative Orthologycytokinin-activated signaling pathwayAT1G59940 AT1G10470
GO:0046777ISOPLAZA Integrative Orthologyprotein autophosphorylationAT1G10470
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT1G10470
GO:0010017ISOPLAZA Integrative Orthologyred or far-red light signaling pathwayAT1G10470
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03D000425
GO:0051716IEAPLAZA Homologycellular response to stimulusHOM03D000425
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000425
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03D000425
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03D000425
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03D000425
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03D000425
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000425
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03D000425
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03D000425
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03D000425
GO:0023052IEAPLAZA HomologysignalingHOM03D000425
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03D000425
GO:0065007IEAPLAZA Homologybiological regulationHOM03D000425
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000425
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03D000425
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03D000425
GO:0007154IEAPLAZA Homologycell communicationHOM03D000425
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000425
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000425
GO:0006351IEAPLAZA Homologytranscription, DNA-templatedHOM03D000425
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03D000425
GO:0007165IEAPLAZA Homologysignal transductionHOM03D000425
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03D000425
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000425
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03D000425
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03D000425
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03D000425
GO:0044700IEAPLAZA Homologysingle organism signalingHOM03D000425
GO:0050896IEAPLAZA Homologyresponse to stimulusHOM03D000425

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000156IEAInterProphosphorelay response regulator activity
GO:0004674ISOPLAZA Integrative Orthologyprotein serine/threonine kinase activityAT1G10470
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT1G10470
GO:0060089IEAPLAZA Homologymolecular transducer activityHOM03D000425
GO:0004871IEAPLAZA Homologysignal transducer activityHOM03D000425

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT1G59940 AT1G10470
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G59940 AT1G10470

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011006CheY-like superfamily
IPR001789Signal transduction response regulator, receiver domain

Mapman id Description
27.3.5RNA.regulation of transcription.ARR
No SignalP domains detected for this gene.