Gene: ME03542G00380 (Manihot esculenta)

Overview top

Gene Identifier
ME03542G00380
Transcript Identifier
ME03542G00380.1
Gene Type
Coding gene
Location
scaffold03542 : 297163-298950 : negative

Family

Gene family
HOM03D000313
(372 genes in 31 species)
specific family
Subfamily
ORTHO03D000541
(79 genes in 27 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
RNAnamecassava4.1_026283m
PACid17973441

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009688ISOPLAZA Integrative Orthologyabscisic acid biosynthetic processSL07G056570 AT1G78390 AT1G30100
GO:0043289ISOPLAZA Integrative Orthologyapocarotenoid biosynthetic processSL07G056570
GO:0006970ISOPLAZA Integrative Orthologyresponse to osmotic stressAT3G14440
GO:0042538ISOPLAZA Integrative Orthologyhyperosmotic salinity responseAT3G14440
GO:0010162ISOPLAZA Integrative Orthologyseed dormancy processAT1G78390 AT1G30100
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT3G14440 AT1G30100

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0045549ISOPLAZA Integrative Orthology9-cis-epoxycarotenoid dioxygenase activityAT3G14440 AT1G78390 AT1G30100 AT4G18350
GO:0016702IEAPLAZA Homologyoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenHOM03D000313

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT3G14440 AT1G78390 AT4G18350
GO:0009535ISOPLAZA Integrative Orthologychloroplast thylakoid membraneAT3G14440 AT4G18350
GO:0009536IEAPLAZA HomologyplastidHOM03D000313

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004294Carotenoid oxygenase

Mapman id Description
17.1.1.1.10hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase
No SignalP domains detected for this gene.