Gene: MD17G021330 (Malus domestica)

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Gene Identifier
MD17G021330
Transcript Identifier
MD17G21330.1
Gene Type
Coding gene
Location
17 : 23868388-23877321 : positive

Family

Gene family
HOM03D000119
(809 genes in 30 species)
specific family
Subfamily
ORTHO03D000427
(89 genes in 28 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Auxin response factor
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidMDP0000550049

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0016192ISOPLAZA Integrative Orthologyvesicle-mediated transportOS12G41950
GO:0006886ISOPLAZA Integrative Orthologyintracellular protein transportOS12G41950
GO:0009908ISOPLAZA Integrative Orthologyflower developmentAT5G37020 AT1G30330
GO:0006471ISOPLAZA Integrative Orthologyprotein ADP-ribosylationOS12G41950
GO:0009733ISOPLAZA Integrative Orthologyresponse to auxinAT5G37020 AT1G30330
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03D000119
GO:0010467IEAPLAZA Homologygene expressionHOM03D000119
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03D000119
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000119
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03D000119
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000119
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03D000119
GO:0042221IEAPLAZA Homologyresponse to chemicalHOM03D000119
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03D000119
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03D000119
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03D000119
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03D000119
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000119
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03D000119
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000119
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03D000119
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03D000119
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03D000119
GO:0009987IEAPLAZA Homologycellular processHOM03D000119
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03D000119
GO:0065007IEAPLAZA Homologybiological regulationHOM03D000119
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000119
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03D000119
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03D000119
GO:0009719IEAPLAZA Homologyresponse to endogenous stimulusHOM03D000119
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03D000119
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03D000119
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03D000119
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03D000119
GO:0009725IEAPLAZA Homologyresponse to hormoneHOM03D000119
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000119
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000119
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000119
GO:0010033IEAPLAZA Homologyresponse to organic substanceHOM03D000119
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03D000119
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03D000119
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03D000119
GO:0006351IEAPLAZA Homologytranscription, DNA-templatedHOM03D000119
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000119
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03D000119
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000119
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03D000119
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03D000119
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03D000119
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03D000119
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000119
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000119
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03D000119
GO:0050896IEAPLAZA Homologyresponse to stimulusHOM03D000119

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983IEAInterProprotein dimerization activity
GO:0003677IEAInterProDNA binding
GO:0003700ISOPLAZA Integrative Orthologysequence-specific DNA binding transcription factor activityAT5G37020
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT1G30330
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000119
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000119
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000119

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0043231IEAPLAZA Homologyintracellular membrane-bounded organelleHOM03D000119
GO:0005622IEAPLAZA HomologyintracellularHOM03D000119
GO:0043226IEAPLAZA HomologyorganelleHOM03D000119
GO:0043227IEAPLAZA Homologymembrane-bounded organelleHOM03D000119
GO:0043229IEAPLAZA Homologyintracellular organelleHOM03D000119
GO:0044464IEAPLAZA Homologycell partHOM03D000119
GO:0044424IEAPLAZA Homologyintracellular partHOM03D000119
GO:0005623IEAPLAZA HomologycellHOM03D000119

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003311AUX/IAA protein
IPR011525Aux/IAA-ARF-dimerisation
IPR003340B3 DNA binding domain
IPR015300DNA-binding pseudobarrel domain

Mapman id Description
27.3.4RNA.regulation of transcription.ARF, Auxin Response Factor family
No SignalP domains detected for this gene.