Gene: MD17G011720 (Malus domestica)

Overview top

Gene Identifier
MD17G011720
Transcript Identifier
MD17G11720.1
Gene Type
Coding gene
Location
17 : 11361935-11366172 : negative

Family

Gene family
HOM03D000046
(1586 genes in 29 species)
specific family
Subfamily
ORTHO03D009173
(28 genes in 20 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Transcription factor PIF5
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidMDP0000198404

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010928ISOPLAZA Integrative Orthologyregulation of auxin mediated signaling pathwayAT3G59060 AT2G43010
GO:0010600ISOPLAZA Integrative Orthologyregulation of auxin biosynthetic processAT3G59060 AT2G43010
GO:0009693ISOPLAZA Integrative Orthologyethylene biosynthetic processAT3G59060
GO:0009585ISOPLAZA Integrative Orthologyred, far-red light phototransductionAT3G59060
GO:0009704ISOPLAZA Integrative Orthologyde-etiolationAT2G43010
GO:0010017ISOPLAZA Integrative Orthologyred or far-red light signaling pathwayAT2G43010
GO:0010161ISOPLAZA Integrative Orthologyred light signaling pathwayAT2G43010

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983IEAInterProprotein dimerization activity
GO:0003677ISOPLAZA Integrative OrthologyDNA bindingAT2G43010
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT2G43010
GO:0005488IEAPLAZA HomologybindingHOM03D000046

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT2G43010

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain

Mapman id Description
27.3.6RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
No SignalP domains detected for this gene.
DatabaseType
PlantTFDBbHLH