Gene: MD04G012420 (Malus domestica)

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Gene Identifier
MD04G012420
Transcript Identifier
MD4G12420.1
Gene Type
Coding gene
Location
4 : 15396865-15402242 : positive

Family

Gene family
HOM03D001463
(109 genes in 31 species)
specific family
Subfamily
ORTHO03D001225
(55 genes in 31 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Pyridoxal biosynthesis lyase PdxS
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidMDP0000275383

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0042823IEAInterPropyridoxal phosphate biosynthetic process
GO:0008152IEAInterPrometabolic process
GO:0042822IEAPLAZA Homologypyridoxal phosphate metabolic processHOM03D001463
GO:0042819ISOPLAZA Integrative Orthologyvitamin B6 biosynthetic processAT2G38230 AT5G01410
GO:0010224ISOPLAZA Integrative Orthologyresponse to UV-BAT5G01410
GO:0006979ISOPLAZA Integrative Orthologyresponse to oxidative stressAT5G01410
GO:0006982ISOPLAZA Integrative Orthologyresponse to lipid hydroperoxideAT5G01410
GO:0008615ISOPLAZA Integrative Orthologypyridoxine biosynthetic processAT5G01410
GO:0042538ISOPLAZA Integrative Orthologyhyperosmotic salinity responseAT5G01410
GO:0006520ISOPLAZA Integrative Orthologycellular amino acid metabolic processAT5G01410
GO:0015994ISOPLAZA Integrative Orthologychlorophyll metabolic processAT5G01410
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT5G01410
GO:0010335ISOPLAZA Integrative Orthologyresponse to non-ionic osmotic stressAT5G01410

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824IEAInterProcatalytic activity
GO:0046982ISOPLAZA Integrative Orthologyprotein heterodimerization activityAT2G38230 AT5G01410
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G01410
GO:0042803ISOPLAZA Integrative Orthologyprotein homodimerization activityAT5G01410

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT2G38230 AT5G01410
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT2G38230
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT5G01410
GO:0012505ISOPLAZA Integrative Orthologyendomembrane systemAT5G01410

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011060Ribulose-phosphate binding barrel
IPR021850Protein of unknown function DUF3453
IPR001852Vitamin B6 biosynthesis protein
IPR013785Aldolase-type TIM barrel

Mapman id Description
18Co-factor and vitamine metabolism
No SignalP domains detected for this gene.