Gene: MD01G006040 (Malus domestica)

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Gene Identifier
MD01G006040
Transcript Identifier
MD1G06040.1
Gene Type
Coding gene
Location
1 : 10212808-10213653 : positive

Family

Gene family
HOM03D000430
(292 genes in 30 species)
specific family
Subfamily
ORTHO03D051445
(2 genes in 1 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
72 kDa type IV collagenase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidMDP0000207838

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006508IEAInterProproteolysis

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAInterProzinc ion binding
GO:0004222IEAInterPrometalloendopeptidase activity
GO:0008237IEAInterPrometallopeptidase activity
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000430
GO:0070011IEAPLAZA Homologypeptidase activity, acting on L-amino acid peptidesHOM03D000430
GO:0004175IEAPLAZA Homologyendopeptidase activityHOM03D000430
GO:0008233IEAPLAZA Homologypeptidase activityHOM03D000430

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0031012IEAInterProextracellular matrix

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR021190Peptidase M10A
IPR001818Peptidase M10, metallopeptidase
IPR024079Metallopeptidase, catalytic domain
IPR002477Peptidoglycan binding-like
IPR021158Peptidase M10A, cysteine switch, zinc binding site

Mapman id Description
29.5.7protein.degradation.metalloprotease
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network