Gene: MD00G057920 (Malus domestica)

Overview top

Gene Identifier
MD00G057920
Transcript Identifier
MD00G57920.1
Gene Type
Coding gene
Location
MDC002412.301 : 3821-15259 : positive

Family

Gene family
HOM03D001246
(123 genes in 31 species)
specific family

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Descriptions

Description (AnnoMine)
factor 3 subunit B
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidMDP0000268597

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006810IEAInterProtransport
GO:0055085IEAInterProtransmembrane transport
GO:0006413IEAInterProtranslational initiation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0005215IEAInterProtransporter activity
GO:0000166IEAInterPronucleotide binding
GO:0003723IEAInterProRNA binding
GO:0022891IEAInterProsubstrate-specific transmembrane transporter activity
GO:0022857IEAInterProtransmembrane transporter activity
GO:0003743IEAInterProtranslation initiation factor activity
GO:0031369IEAInterProtranslation initiation factor binding
GO:0003676IEAInterPronucleic acid binding
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D001246

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005852IEAInterProeukaryotic translation initiation factor 3 complex
GO:0016020IEAInterPromembrane
GO:0016021IEAInterProintegral to membrane
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G27640 AT5G25780
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G27640 AT5G25780
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT5G25780

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011400Eukaryotic translation initiation factor 3 subunit B
IPR013979Translation initiation factor, beta propellor-like domain
IPR000504RNA recognition motif domain
IPR003663Sugar/inositol transporter
IPR005140eRF1 domain 1/Pelota-like
IPR015943WD40/YVTN repeat-like-containing domain
IPR005829Sugar transporter, conserved site
IPR016196Major facilitator superfamily domain, general substrate transporter
IPR020846Major facilitator superfamily domain
IPR012677Nucleotide-binding, alpha-beta plait
IPR005141eRF1 domain 2
IPR005142eRF1 domain 3
IPR005828General substrate transporter
IPR011042Six-bladed beta-propeller, TolB-like
IPR004405Translation release factor pelota-like

Mapman id Description
34.2transport.sugars
No SignalP domains detected for this gene.