Gene: LJCG00050 (Lotus japonicus)
Overview 
- Gene Identifier
- LJCG00050
- Transcript Identifier
- LJCG00050.1
- Gene Type
- Coding gene
- Location
- chloroplast : 5158-6585 : negative
Family
- Gene family
- Subfamily
Descriptions
- Description
-
Ribulose bisphosphate carboxylase large chain
- Description (AnnoMine)
-
bisphosphate carboxylase large chain
Identifiers
Identifier | Name |
---|---|
GeneName | rbcL |
GeneName | large subunit of riblose-1,5-bisphosphatecarboxylase/oxygenase |
pid | BAB33178.1 |
uniprot | Q9BBU1 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0015977 | IEA | InterPro | carbon fixation | |
GO:0009853 | IEA | UniProt | photorespiration | 1 |
GO:0019253 | IEA | UniProt | reductive pentose-phosphate cycle | 1 |
GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | ATCG00490 |
GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | ATCG00490 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0000287 | IEA | UniProt | magnesium ion binding | 1 |
GO:0016984 | IEA | UniProt | ribulose-bisphosphate carboxylase activity | 1 |
GO:0004497 | IEA | UniProt | monooxygenase activity | 1 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0009507 | IEA | UniProt | chloroplast | 1 |
GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | ATCG00490 |
GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | ATCG00490 |
GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | ATCG00490 |
GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | ATCG00490 |
GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | ATCG00490 |
GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | ATCG00490 |
GO:0010287 | ISO | PLAZA Integrative Orthology | plastoglobule | ATCG00490 |
GO:0016020 | ISO | PLAZA Integrative Orthology | membrane | ATCG00490 |
GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | ATCG00490 |
GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | OS10G21268 OSCG00540 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
InterPro | Description |
---|---|
IPR020878 | Ribulose bisphosphate carboxylase, large chain, active site |
IPR000685 | Ribulose bisphosphate carboxylase, large subunit, C-terminal |
IPR020888 | Ribulose bisphosphate carboxylase, large subunit |
IPR017444 | Ribulose bisphosphate carboxylase, large subunit, N-terminal |
IPR017443 | Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.