Gene: LJ5G025170 (Lotus japonicus)

Overview top

Gene Identifier
LJ5G025170
Transcript Identifier
LJ5G025170.1
Gene Type
Coding gene
Location
chr5 : 24198172-24199257 : positive

Family

Gene family
HOM03D000017
(2380 genes in 31 species)
specific family
Subfamily
ORTHO03D002416
(42 genes in 28 species)
specific family

Loading...please wait

Descriptions

Description (AnnoMine)
Putative RING-H2 finger protein ATL36
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
namechr5.CM0211.260.r2.d

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009814ISOPLAZA Integrative Orthologydefense response, incompatible interactionAT3G05200
GO:0009816ISOPLAZA Integrative Orthologydefense response to bacterium, incompatible interactionAT3G05200
GO:0010200ISOPLAZA Integrative Orthologyresponse to chitinAT3G05200
GO:0016567ISOPLAZA Integrative Orthologyprotein ubiquitinationAT3G05200

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT3G05200
GO:0043169IEAPLAZA Homologycation bindingHOM03D000017
GO:0005488IEAPLAZA HomologybindingHOM03D000017
GO:0043167IEAPLAZA Homologyion bindingHOM03D000017
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000017
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000017

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT3G05200

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

No MapMan annotations defined for this gene.
SignalP Description
SignalP-TMSignal Peptide detected using TM network