Gene: LJ2G008640 (Lotus japonicus)

Overview top

Gene Identifier
LJ2G008640
Transcript Identifier
LJ2G008640.1
Gene Type
Coding gene
Location
chr2 : 9228155-9231322 : negative

Family

Gene family
HOM03D000194
(528 genes in 29 species)
specific family
Subfamily
ORTHO03D000009
(367 genes in 29 species)
specific family

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Descriptions

Description (AnnoMine)
zipper protein PROTODERMAL FACTOR 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
namechr2.CM0435.950.r2.a

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03D000194
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000194
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03D000194
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03D000194
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03D000194
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03D000194
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000194
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03D000194
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03D000194
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03D000194
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03D000194
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000194
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03D000194
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03D000194
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000194
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000194
GO:0006351IEAPLAZA Homologytranscription, DNA-templatedHOM03D000194
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03D000194
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03D000194
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000194
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03D000194
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03D000194
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03D000194
GO:0010091ISOPLAZA Integrative Orthologytrichome branchingAT1G17920 AT1G73360
GO:0048497ISOPLAZA Integrative Orthologymaintenance of floral organ identityAT1G17920 AT5G46880
GO:0009957ISOPLAZA Integrative Orthologyepidermal cell fate specificationAT1G79840
GO:0010062ISOPLAZA Integrative Orthologynegative regulation of trichoblast fate specificationAT1G79840

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0043565IEAInterProsequence-specific DNA binding
GO:0003700IEAInterProsequence-specific DNA binding transcription factor activity
GO:0003677IEAInterProDNA binding
GO:0008289IEAInterProlipid binding
GO:0001071IEAPLAZA Homologynucleic acid binding transcription factor activityHOM03D000194
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT1G73360 AT4G17710

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009057Homeodomain-like
IPR017970Homeobox, conserved site
IPR023393START-like domain
IPR002913START domain
IPR001356Homeobox domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.
DatabaseType
PlantTFDBHD-ZIP