Gene: LJ2G000050 (Lotus japonicus)

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Gene Identifier
LJ2G000050
Transcript Identifier
LJ2G000050.1
Gene Type
Coding gene
Location
chr2 : 27709-33156 : positive

Family

Gene family
HOM03D000044
(1608 genes in 28 species)
specific family
Subfamily
ORTHO03D002278
(42 genes in 1 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
Transposon Ty3-G Gag-Pol polyprotein
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
namechr2.CM0067.50.r2.m

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0015074IEAInterProDNA integration
GO:0006278IEAInterProRNA-dependent DNA replication
GO:0006259IEAPLAZA HomologyDNA metabolic processHOM03D000044

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003723IEAInterProRNA binding
GO:0004523IEAInterProribonuclease H activity
GO:0003964IEAInterProRNA-directed DNA polymerase activity
GO:0003676IEAInterPronucleic acid binding

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001584Integrase, catalytic core
IPR000477Reverse transcriptase
IPR021109Aspartic peptidase domain
IPR005162Retrotransposon gag domain
IPR002156Ribonuclease H domain
IPR012337Ribonuclease H-like domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.