Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchGene: LJ1G075660 (Lotus japonicus)
Overview 
- Gene Identifier
- LJ1G075660
- Transcript Identifier
- LJ1G075660.1
- Gene Type
- Coding gene
- Location
- chr1 : 66684673-66685524 : negative
Family
- Gene family
- Subfamily
Descriptions
- Description (AnnoMine)
-
H2 finger protein
Description of best ortholog(s):
Identifiers
| Identifier | Name |
|---|---|
| name | chr1.CM0105.2180.r2.m |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0043169 | IEA | PLAZA Homology | cation binding | HOM03D000017 |
| GO:0005488 | IEA | PLAZA Homology | binding | HOM03D000017 |
| GO:0043167 | IEA | PLAZA Homology | ion binding | HOM03D000017 |
| GO:0046914 | IEA | PLAZA Homology | transition metal ion binding | HOM03D000017 |
| GO:0046872 | IEA | PLAZA Homology | metal ion binding | HOM03D000017 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.