Gene: LJ1G068870 (Lotus japonicus)
Overview 
- Gene Identifier
- LJ1G068870
- Transcript Identifier
- LJ1G068870.1
- Gene Type
- Coding gene
- Location
- chr1 : 61812528-61816192 : positive
Family
- Gene family
- Subfamily
Descriptions
- Description (AnnoMine)
-
Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic
Description of best ortholog(s):

Identifiers
Identifier | Name |
---|---|
name | chr1.CM0122.290.r2.m |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-dependent | AT1G09340 |
GO:0005996 | ISO | PLAZA Integrative Orthology | monosaccharide metabolic process | AT1G09340 |
GO:0045727 | ISO | PLAZA Integrative Orthology | positive regulation of translation | AT1G09340 |
GO:0032544 | ISO | PLAZA Integrative Orthology | plastid translation | AT1G09340 |
GO:0006364 | ISO | PLAZA Integrative Orthology | rRNA processing | AT1G09340 |
GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT1G09340 |
GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT1G09340 |
GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT1G09340 |
GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT1G09340 |
GO:0042631 | ISO | PLAZA Integrative Orthology | cellular response to water deprivation | AT1G09340 |
GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT1G09340 |
GO:0044237 | IEA | PLAZA Homology | cellular metabolic process | HOM03D002469 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0010297 | ISO | PLAZA Integrative Orthology | heteropolysaccharide binding | AT1G09340 |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G09340 |
GO:0003723 | ISO | PLAZA Integrative Orthology | RNA binding | AT1G09340 |
GO:0050662 | IEA | PLAZA Homology | coenzyme binding | HOM03D002469 |
GO:0003824 | IEA | PLAZA Homology | catalytic activity | HOM03D002469 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G09340 |
GO:0048046 | ISO | PLAZA Integrative Orthology | apoplast | AT1G09340 |
GO:0005840 | ISO | PLAZA Integrative Orthology | ribosome | AT1G09340 |
GO:0005777 | ISO | PLAZA Integrative Orthology | peroxisome | AT1G09340 |
GO:0016020 | ISO | PLAZA Integrative Orthology | membrane | AT1G09340 |
GO:0010319 | ISO | PLAZA Integrative Orthology | stromule | AT1G09340 |
GO:0010287 | ISO | PLAZA Integrative Orthology | plastoglobule | AT1G09340 |
GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT1G09340 |
GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT1G09340 |
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G09340 |
GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT1G09340 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.