Gene: LJ1G059760 (Lotus japonicus)

Overview top

Gene Identifier
LJ1G059760
Transcript Identifier
LJ1G059760.1
Gene Type
Coding gene
Location
chr1 : 54768216-54769367 : positive

Family

Gene family
HOM03D000573
(233 genes in 31 species)
specific family
Subfamily
ORTHO03D000466
(85 genes in 31 species)
specific family

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Descriptions

Description (AnnoMine)
Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
namechr1.CM0221.120.r2.m

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006629IEAInterProlipid metabolic process
GO:0055114IEAInterProoxidation-reduction process
GO:0006636ISOPLAZA Integrative Orthologyunsaturated fatty acid biosynthetic processSL06G007130 AT2G29980
GO:0009266ISOPLAZA Integrative Orthologyresponse to temperature stimulusAT5G05580
GO:0006633ISOPLAZA Integrative Orthologyfatty acid biosynthetic processAT5G05580 AT3G11170
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldAT3G11170
GO:0080167ISOPLAZA Integrative Orthologyresponse to karrikinAT2G29980

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016717IEAInterProoxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0042389ISOPLAZA Integrative Orthologyomega-3 fatty acid desaturase activitySL06G007130 AT5G05580 AT3G11170 AT2G29980
GO:0016720ISOPLAZA Integrative Orthologydelta12-fatty acid dehydrogenase activityAT3G12120
GO:0045485ISOPLAZA Integrative Orthologyomega-6 fatty acid desaturase activityAT3G12120

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumSL06G007130 AT2G29980
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT5G05580 AT3G11170
GO:0042170ISOPLAZA Integrative Orthologyplastid membraneAT3G11170
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT3G11170

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR021863Protein of unknown function DUF3474
IPR005804Fatty acid desaturase, type 1

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.