Gene: GR13G10680 (Gossypium raimondii)

Overview top

Gene Identifier
GR13G10680
Transcript Identifier
GR13G10680.1
Gene Type
Coding gene
Location
Chr13 : 23045762-23046925 : positive

Family

Gene family
HOM03D002814
(65 genes in 23 species)
specific family
Subfamily
ORTHO03D041264
(3 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
DNA-directed RNA polymerase subunit alpha
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidGorai.013G106800.1
idPAC:26790386

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006412IEAGenome Projecttranslation
GO:0006351IEAGenome Projecttranscription, DNA-templated
GO:0006354ISOPLAZA Tree-based OrthologyDNA-dependent transcription, elongationATCG00740

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003735IEAGenome Projectstructural constituent of ribosome
GO:0003899IEAGenome ProjectDNA-directed RNA polymerase activity
GO:0046983IEAGenome Projectprotein dimerization activity
GO:0003677IEAPLAZA HomologyDNA bindingHOM03D002814

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAGenome Projectintracellular
GO:0005840IEAGenome Projectribosome
GO:0009570ISOPLAZA Tree-based Orthologychloroplast stromaATCG00740
GO:0009534ISOPLAZA Tree-based Orthologychloroplast thylakoidATCG00740
GO:0009295ISOPLAZA Tree-based OrthologynucleoidATCG00740
GO:0043229IEAPLAZA Homologyintracellular organelleHOM03D002814
GO:0044444IEAPLAZA Homologycytoplasmic partHOM03D002814

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011262DNA-directed RNA polymerase, insert domain
IPR001971Ribosomal protein S11
IPR009025DNA-directed RNA polymerase, RBP11-like dimerisation domain

Mapman id Description
27.2RNA.transcription
No SignalP domains detected for this gene.