Gene: GR12G08260 (Gossypium raimondii)

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Gene Identifier
GR12G08260
Transcript Identifier
GR12G08260.1
Gene Type
Coding gene
Location
Chr12 : 13642874-13649923 : positive

Family

Gene family
HOM03D000224
(463 genes in 30 species)
specific family
Subfamily
ORTHO03D001599
(48 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
lysine-27, H4 lysine-20 and cytosine specific SUVH2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidGorai.012G082600.2
idPAC:26827249

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0034968IEAGenome Projecthistone lysine methylation
GO:0016571IEAInterProhistone methylation
GO:0006325IEAPLAZA Homologychromatin organizationHOM03D000224
GO:0032259IEAPLAZA HomologymethylationHOM03D000224
GO:0006996IEAPLAZA Homologyorganelle organizationHOM03D000224
GO:0016043IEAPLAZA Homologycellular component organizationHOM03D000224
GO:0051276IEAPLAZA Homologychromosome organizationHOM03D000224
GO:0006479IEAPLAZA Homologyprotein methylationHOM03D000224
GO:0071840IEAPLAZA Homologycellular component organization or biogenesisHOM03D000224
GO:0016570IEAPLAZA Homologyhistone modificationHOM03D000224
GO:0043414IEAPLAZA Homologymacromolecule methylationHOM03D000224
GO:0043412IEAPLAZA Homologymacromolecule modificationHOM03D000224
GO:0008213IEAPLAZA Homologyprotein alkylationHOM03D000224
GO:0006464IEAPLAZA Homologycellular protein modification processHOM03D000224
GO:0016569IEAPLAZA Homologycovalent chromatin modificationHOM03D000224
GO:0036211IEAPLAZA Homologyprotein modification processHOM03D000224
GO:0016568IEAPLAZA Homologychromatin modificationHOM03D000224
GO:0010216ISOPLAZA Integrative Orthologymaintenance of DNA methylationAT5G13960
GO:0018022ISOPLAZA Integrative Orthologypeptidyl-lysine methylationAT5G13960
GO:0051567ISOPLAZA Integrative Orthologyhistone H3-K9 methylationAT5G13960

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0042393IEAGenome Projecthistone binding
GO:0008270IEAGenome Projectzinc ion binding
GO:0018024IEAGenome Projecthistone-lysine N-methyltransferase activity
GO:0005515IEAInterProprotein binding
GO:0008168IEAPLAZA Homologymethyltransferase activityHOM03D000224
GO:0008757IEAPLAZA HomologyS-adenosylmethionine-dependent methyltransferase activityHOM03D000224
GO:0008170IEAPLAZA HomologyN-methyltransferase activityHOM03D000224
GO:0008276IEAPLAZA Homologyprotein methyltransferase activityHOM03D000224
GO:0042054IEAPLAZA Homologyhistone methyltransferase activityHOM03D000224
GO:0016278IEAPLAZA Homologylysine N-methyltransferase activityHOM03D000224
GO:0016279IEAPLAZA Homologyprotein-lysine N-methyltransferase activityHOM03D000224
GO:0016741IEAPLAZA Homologytransferase activity, transferring one-carbon groupsHOM03D000224
GO:0046974ISOPLAZA Integrative Orthologyhistone methyltransferase activity (H3-K9 specific)AT5G13960
GO:0008327ISOPLAZA Integrative Orthologymethyl-CpG bindingAT5G13960
GO:0010385ISOPLAZA Integrative Orthologydouble-stranded methylated DNA bindingAT5G13960
GO:0010428ISOPLAZA Integrative Orthologymethyl-CpNpG bindingAT5G13960
GO:0010429ISOPLAZA Integrative Orthologymethyl-CpNpN bindingAT5G13960

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001214SET domain
IPR007728Pre-SET domain
IPR003606Pre-SET zinc-binding sub-group
IPR003105SRA-YDG
IPR015947PUA-like domain
IPR003616Post-SET domain
IPR025794Histone H3-K9 methyltransferase, plant

Mapman id Description
27.3.69RNA.regulation of transcription.SET-domain transcriptional regulator family
No SignalP domains detected for this gene.