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WorkbenchGene: GR11G15570 (Gossypium raimondii)
Overview 
- Gene Identifier
- GR11G15570
- Transcript Identifier
- GR11G15570.1
- Gene Type
- Coding gene
- Location
- Chr11 : 27103509-27107938 : negative
Family
- Gene family
- Duplication type
- Tandem duplicate
Descriptions
- Description (AnnoMine)
-
Putative pentatricopeptide repeat-containing protein At1g74580
Description of best ortholog(s):
Identifiers
| Identifier | Name |
|---|---|
| pid | Gorai.011G155700.1 |
| id | PAC:26807718 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...the gene in Genomeview, a genome browser
- ...all colinear gene pairs.
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0005488 | IEA | PLAZA Homology | binding | HOM03D000002 |
Color Legend
| Experimental Evidence |
| Electronic Evidence |
| Computational Reviewed Evidence |
| Mapman id | Description |
|---|---|
| 35.1.5 | not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein |
No SignalP domains detected for this gene.