Gene: GR05G12840 (Gossypium raimondii)

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Gene Identifier
GR05G12840
Transcript Identifier
GR05G12840.1
Gene Type
Coding gene
Location
Chr05 : 29865188-29877414 : negative

Family

Gene family
HOM03D000319
(368 genes in 31 species)
specific family
Subfamily
ORTHO03D005459
(34 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Prolyl 4-hydroxylase subunit alpha
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidGorai.005G128400.1
idPAC:26802102

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0018401ISOPLAZA Integrative Orthologypeptidyl-proline hydroxylation to 4-hydroxy-L-prolineAT2G43080
GO:0044710IEAPLAZA Homologysingle-organism metabolic processHOM03D000319

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016491IEAGenome Projectoxidoreductase activity
GO:0016706IEAGenome Projectoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0031418IEAInterProL-ascorbic acid binding
GO:0005506IEAInterProiron ion binding
GO:0016705IEAInterProoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0004656ISOPLAZA Integrative Orthologyprocollagen-proline 4-dioxygenase activityAT2G43080
GO:0031406IEAPLAZA Homologycarboxylic acid bindingHOM03D000319
GO:0043177IEAPLAZA Homologyorganic acid bindingHOM03D000319
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000319
GO:0043169IEAPLAZA Homologycation bindingHOM03D000319
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000319
GO:0051213IEAPLAZA Homologydioxygenase activityHOM03D000319
GO:0019842IEAPLAZA Homologyvitamin bindingHOM03D000319
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000319
GO:0030246IEAPLAZA Homologycarbohydrate bindingHOM03D000319
GO:0048029IEAPLAZA Homologymonosaccharide bindingHOM03D000319

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005794ISOPLAZA Integrative OrthologyGolgi apparatusAT2G43080

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005123Oxoglutarate/iron-dependent dioxygenase
IPR006620Prolyl 4-hydroxylase, alpha subunit

Mapman id Description
26.7misc.oxidases - copper, flavone etc
No SignalP domains detected for this gene.