PLAZA 3.0 Dicots gene overview : GM20G02871

Gene: GM20G02871 (Glycine max)

Overview

Gene Identifier: GM20G02871
Transcript Identifier: GM20G02871.1
Gene Type: Coding gene
Location: Gm20 : 2523550-2524195 : negative

Family

Gene family: HOM03D000094
(1037 genes in 22 species)
specific family
Duplication type: Tandem duplicate

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Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Glyma20g02871.1
id	PAC:26337590

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...the gene in Genomeview, a genome browser
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006807	IEA	PLAZA Homology	nitrogen compound metabolic process	HOM03D000094
GO:0006725	IEA	PLAZA Homology	cellular aromatic compound metabolic process	HOM03D000094
GO:0051276	IEA	PLAZA Homology	chromosome organization	HOM03D000094
GO:0051716	IEA	PLAZA Homology	cellular response to stimulus	HOM03D000094
GO:0090304	IEA	PLAZA Homology	nucleic acid metabolic process	HOM03D000094
GO:0044260	IEA	PLAZA Homology	cellular macromolecule metabolic process	HOM03D000094
GO:0060249	IEA	PLAZA Homology	anatomical structure homeostasis	HOM03D000094
GO:0044763	IEA	PLAZA Homology	single-organism cellular process	HOM03D000094
GO:0034641	IEA	PLAZA Homology	cellular nitrogen compound metabolic process	HOM03D000094
GO:0044710	IEA	PLAZA Homology	single-organism metabolic process	HOM03D000094
GO:0000723	IEA	PLAZA Homology	telomere maintenance	HOM03D000094
GO:0071840	IEA	PLAZA Homology	cellular component organization or biogenesis	HOM03D000094
GO:0046483	IEA	PLAZA Homology	heterocycle metabolic process	HOM03D000094
GO:0006996	IEA	PLAZA Homology	organelle organization	HOM03D000094
GO:0065007	IEA	PLAZA Homology	biological regulation	HOM03D000094
GO:0006950	IEA	PLAZA Homology	response to stress	HOM03D000094
GO:0065008	IEA	PLAZA Homology	regulation of biological quality	HOM03D000094
GO:0033554	IEA	PLAZA Homology	cellular response to stress	HOM03D000094
GO:0042592	IEA	PLAZA Homology	homeostatic process	HOM03D000094
GO:0006259	IEA	PLAZA Homology	DNA metabolic process	HOM03D000094
GO:0006974	IEA	PLAZA Homology	cellular response to DNA damage stimulus	HOM03D000094
GO:0006139	IEA	PLAZA Homology	nucleobase-containing compound metabolic process	HOM03D000094
GO:1901360	IEA	PLAZA Homology	organic cyclic compound metabolic process	HOM03D000094
GO:0006281	IEA	PLAZA Homology	DNA repair	HOM03D000094
GO:0032200	IEA	PLAZA Homology	telomere organization	HOM03D000094
GO:0050896	IEA	PLAZA Homology	response to stimulus	HOM03D000094
GO:0016043	IEA	PLAZA Homology	cellular component organization	HOM03D000094

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016817	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides	HOM03D000094
GO:0016818	IEA	PLAZA Homology	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	HOM03D000094
GO:0016462	IEA	PLAZA Homology	pyrophosphatase activity	HOM03D000094
GO:0017111	IEA	PLAZA Homology	nucleoside-triphosphatase activity	HOM03D000094
GO:0004386	IEA	PLAZA Homology	helicase activity	HOM03D000094
GO:0003678	IEA	PLAZA Homology	DNA helicase activity	HOM03D000094
GO:0016787	IEA	PLAZA Homology	hydrolase activity	HOM03D000094

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

No InterPro domains detected for this gene.

Mapman id	Description
28.99	DNA.unspecified

No SignalP domains detected for this gene.