Gene: GM17G03300 (Glycine max)

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Gene Identifier
GM17G03300
Transcript Identifier
GM17G03300.1
Gene Type
Coding gene
Location
Gm17 : 2196033-2198472 : positive

Family

Gene family
HOM03D000270
(417 genes in 30 species)
specific family
Subfamily
ORTHO03D001171
(56 genes in 24 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Probable polygalacturonase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidGlyma17g03300.1
idPAC:26313353

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAGenome Projectcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004650IEAGenome Projectpolygalacturonase activity
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000270
GO:0016798IEAPLAZA Homologyhydrolase activity, acting on glycosyl bondsHOM03D000270
GO:0004553IEAPLAZA Homologyhydrolase activity, hydrolyzing O-glycosyl compoundsHOM03D000270

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005773ISOPLAZA Integrative OrthologyvacuoleAT3G16850
GO:0009505ISOPLAZA Integrative Orthologyplant-type cell wallAT3G16850

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006626Parallel beta-helix repeat
IPR011050Pectin lyase fold/virulence factor
IPR000743Glycoside hydrolase, family 28
IPR012334Pectin lyase fold

Mapman id Description
10.6.3cell wall.degradation.pectate lyases and polygalacturonases
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network