Gene: GM16G26210 (Glycine max)

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Gene Identifier
GM16G26210
Transcript Identifier
GM16G26210.1
Gene Type
Coding gene
Location
Gm16 : 30369631-30374362 : positive

Family

Gene family
HOM03D002277
(77 genes in 30 species)
specific family
Subfamily
ORTHO03D001252
(54 genes in 30 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
base biosynthesis protein 2b
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidGlyma16g26210.1
idPAC:26352062

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009058IEAGenome Projectbiosynthetic process
GO:0006520IEAGenome Projectcellular amino acid metabolic process
GO:0008152IEAInterPrometabolic process
GO:0043067ISOPLAZA Integrative Orthologyregulation of programmed cell deathAT5G23670
GO:0009640ISOPLAZA Integrative OrthologyphotomorphogenesisAT5G23670 AT3G48780
GO:0009555ISOPLAZA Integrative Orthologypollen developmentAT5G23670 AT3G48780
GO:0046512ISOPLAZA Integrative Orthologysphingosine biosynthetic processAT5G23670
GO:0030148ISOPLAZA Integrative Orthologysphingolipid biosynthetic processAT3G48780

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016740IEAGenome Projecttransferase activity
GO:0030170IEAGenome Projectpyridoxal phosphate binding
GO:0016829IEAGenome Projectlyase activity
GO:0016769IEAGenome Projecttransferase activity, transferring nitrogenous groups
GO:0003824IEAInterProcatalytic activity
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G23670
GO:0004758ISOPLAZA Integrative Orthologyserine C-palmitoyltransferase activityAT5G23670 AT3G48780

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005773ISOPLAZA Integrative OrthologyvacuoleAT5G23670
GO:0016020ISOPLAZA Integrative OrthologymembraneAT5G23670
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT5G23670

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001917Aminotransferase, class-II, pyridoxal-phosphate binding site
IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR004839Aminotransferase, class I/classII
IPR015424Pyridoxal phosphate-dependent transferase

Mapman id Description
11.8.1.2lipid metabolism.exotics (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase
No SignalP domains detected for this gene.