PLAZA 3.0 Dicots gene overview : GM05G22380

Gene: GM05G22380 (Glycine max)

Overview

Gene Identifier: GM05G22380
Transcript Identifier: GM05G22380.1
Gene Type: Coding gene
Location: Gm05 : 27482157-27486142 : negative

Family

Gene family: HOM03D000097
(1012 genes in 29 species)
specific family
Subfamily: ORTHO03D007042
(31 genes in 13 species)
specific family
Duplication type: Tandem duplicate and Block duplicate

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Descriptions

Description (AnnoMine): POZ domain-containing protein NPY2

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	Glyma05g22380.1
id	PAC:26321653

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...the gene in Genomeview, a genome browser
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0009416	IEA	Genome Project	response to light stimulus
GO:0009314	IEA	PLAZA Homology	response to radiation	HOM03D000097
GO:0009628	IEA	PLAZA Homology	response to abiotic stimulus	HOM03D000097

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005515	IEA	Genome Project	protein binding
GO:0004871	IEA	Genome Project	signal transducer activity
GO:0060089	IEA	PLAZA Homology	molecular transducer activity	HOM03D000097

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR000210	BTB/POZ-like
IPR011333	BTB/POZ fold
IPR027356	NPH3 domain
IPR013069	BTB/POZ

Mapman id	Description
30.11	signalling.light

No SignalP domains detected for this gene.