Gene: FV6G06250 (Fragaria vesca)

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Gene Identifier
FV6G06250
Transcript Identifier
FV6G06250.1
Gene Type
Coding gene
Location
LG6 : 5750261-5756155 : negative

Family

Gene family
HOM03D004716
(42 genes in 31 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description
DNA excision repair protein ERCC-1 (AtERCC1) (similar to)
Description (AnnoMine)
excision repair protein ERCC-1

Identifiers

Identifier Name
pidgene22595

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281IEAInterProDNA repair
GO:0009816ISOPLAZA Integrative Orthologydefense response to bacterium, incompatible interactionAT3G05200
GO:0010200ISOPLAZA Integrative Orthologyresponse to chitinAT3G05200
GO:0016567ISOPLAZA Integrative Orthologyprotein ubiquitinationAT3G05200
GO:0009814ISOPLAZA Integrative Orthologydefense response, incompatible interactionAT3G05200
GO:0010332ISOPLAZA Integrative Orthologyresponse to gamma radiationAT3G05210
GO:0000724ISOPLAZA Integrative Orthologydouble-strand break repair via homologous recombinationAT3G05210
GO:0006294ISOPLAZA Integrative Orthologynucleotide-excision repair, preincision complex assemblyAT3G05210
GO:0010213ISOPLAZA Integrative Orthologynon-photoreactive DNA repairAT3G05210
GO:0010224ISOPLAZA Integrative Orthologyresponse to UV-BAT3G05210

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0003684IEAInterProdamaged DNA binding
GO:0004519IEAInterProendonuclease activity
GO:0008270IEAInterProzinc ion binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT3G05200
GO:0017108ISOPLAZA Integrative Orthology5'-flap endonuclease activityAT3G05210

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT3G05200

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR004579DNA repair protein rad10
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR011335Restriction endonuclease type II-like

No MapMan annotations defined for this gene.
SignalP Description
SignalP-TMSignal Peptide detected using TM network