Gene: FV2G20800 (Fragaria vesca)

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Gene Identifier
FV2G20800
Transcript Identifier
FV2G20800.1
Gene Type
Coding gene
Location
LG2 : 14425227-14436680 : positive

Family

Gene family
HOM03D005949
(36 genes in 29 species)
specific family

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Descriptions

Description
DEAD-box ATP-dependent RNA helicase 39 (similar to)
Description (AnnoMine)
box ATP-dependent RNA helicase 39

Identifiers

Identifier Name
pidgene27561

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006166IEAInterPropurine ribonucleoside salvage
GO:0009116IEAInterPronucleoside metabolic process
GO:0080158ISOPLAZA Integrative Orthologychloroplast ribulose bisphosphate carboxylase complex biogenesisAT4G09730
GO:1901259ISOPLAZA Integrative Orthologychloroplast rRNA processingAT4G09730
GO:0046098ISOPLAZA Integrative Orthologyguanine metabolic processAT1G71750
GO:0046100ISOPLAZA Integrative Orthologyhypoxanthine metabolic processAT1G71750
GO:0009845ISOPLAZA Integrative Orthologyseed germinationAT1G71750
GO:0043174IEAPLAZA Homologynucleoside salvageHOM03D005949

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008026IEAInterProATP-dependent helicase activity
GO:0004422IEAInterProhypoxanthine phosphoribosyltransferase activity
GO:0004386IEAInterProhelicase activity
GO:0003676IEAInterPronucleic acid binding
GO:0005524IEAInterProATP binding
GO:0070180ISOPLAZA Integrative OrthologyLSU rRNA bindingAT4G09730
GO:0016887ISOPLAZA Integrative OrthologyATPase activityAT4G09730

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAInterProcytoplasm
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT4G09730
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G71750

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR014014RNA helicase, DEAD-box type, Q motif
IPR000836Phosphoribosyltransferase domain
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR005904Hypoxanthine phosphoribosyl transferase
IPR001650Helicase, C-terminal
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.