Gene: FV0G20780 (Fragaria vesca)

Overview top

Gene Identifier
FV0G20780
Transcript Identifier
FV0G20780.1
Gene Type
Coding gene
Location
scf0513160 : 5980563-5983821 : negative

Family

Gene family
HOM03D000122
(802 genes in 29 species)
specific family
Subfamily
ORTHO03D006492
(32 genes in 22 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Auxin-responsive protein IAA9 (putative)
Description (AnnoMine)
Auxin-responsive protein

Identifiers

Identifier Name
pidgene05555

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0010930ISOPLAZA Integrative Orthologynegative regulation of auxin mediated signaling pathwaySL04G076850
GO:0010154ISOPLAZA Integrative Orthologyfruit developmentSL04G076850
GO:0060777ISOPLAZA Integrative Orthologycompound leaf morphogenesisSL04G076850
GO:0009733ISOPLAZA Integrative Orthologyresponse to auxinOS01G13030 AT5G65670 AT2G22670
GO:0045892ISOPLAZA Integrative Orthologynegative regulation of transcription, DNA-dependentAT2G22670
GO:0009734ISOPLAZA Integrative Orthologyauxin mediated signaling pathwayAT5G65670
GO:0010311ISOPLAZA Integrative Orthologylateral root formationAT2G22670
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03D000122
GO:0010467IEAPLAZA Homologygene expressionHOM03D000122
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03D000122
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000122
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03D000122
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000122
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03D000122
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03D000122
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03D000122
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03D000122
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03D000122
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000122
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03D000122
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000122
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03D000122
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03D000122
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03D000122
GO:0009987IEAPLAZA Homologycellular processHOM03D000122
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03D000122
GO:0065007IEAPLAZA Homologybiological regulationHOM03D000122
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000122
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03D000122
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03D000122
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03D000122
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03D000122
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03D000122
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03D000122
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000122
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000122
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000122
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03D000122
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03D000122
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03D000122
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000122
GO:0006351IEAPLAZA Homologytranscription, DNA-templatedHOM03D000122
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03D000122
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000122
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03D000122
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03D000122
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03D000122
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03D000122
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000122
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000122
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03D000122

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983IEAInterProprotein dimerization activity
GO:0003700ISOPLAZA Integrative Orthologysequence-specific DNA binding transcription factor activitySL04G076850
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT2G22670
GO:0005488IEAPLAZA HomologybindingHOM03D000122

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT2G22670
GO:0043231IEAPLAZA Homologyintracellular membrane-bounded organelleHOM03D000122
GO:0005622IEAPLAZA HomologyintracellularHOM03D000122
GO:0043226IEAPLAZA HomologyorganelleHOM03D000122
GO:0043227IEAPLAZA Homologymembrane-bounded organelleHOM03D000122
GO:0043229IEAPLAZA Homologyintracellular organelleHOM03D000122
GO:0044464IEAPLAZA Homologycell partHOM03D000122
GO:0044424IEAPLAZA Homologyintracellular partHOM03D000122
GO:0005623IEAPLAZA HomologycellHOM03D000122

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003311AUX/IAA protein
IPR011525Aux/IAA-ARF-dimerisation

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.