Gene: FV0G00240 (Fragaria vesca)

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Gene Identifier
FV0G00240
Transcript Identifier
FV0G00240.1
Gene Type
Coding gene
Location
scf0513158 : 173290-175476 : negative

Family

Gene family
HOM03D000052
(1449 genes in 30 species)
specific family
Subfamily
ORTHO03D007241
(31 genes in 28 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
Polygalacturonase At1g48100 (PG), Precursor (probable)
Description (AnnoMine)
Probable polygalacturonase At1g80170

Identifiers

Identifier Name
pidgene03600

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAInterProcarbohydrate metabolic process
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000052
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000052
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000052

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004650IEAInterPropolygalacturonase activity
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000052
GO:0016798IEAPLAZA Homologyhydrolase activity, acting on glycosyl bondsHOM03D000052
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000052
GO:0004553IEAPLAZA Homologyhydrolase activity, hydrolyzing O-glycosyl compoundsHOM03D000052

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011050Pectin lyase fold/virulence factor
IPR006626Parallel beta-helix repeat
IPR012334Pectin lyase fold
IPR000743Glycoside hydrolase, family 28

No MapMan annotations defined for this gene.
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network