Gene: EG0005G32550 (Eucalyptus grandis)

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Gene Identifier
EG0005G32550
Transcript Identifier
EG0005G32550.1
Gene Type
Coding gene
Location
scaffold_5 : 73617972-73627437 : positive

Family

Gene family
HOM03D000113
(850 genes in 31 species)
specific family
Subfamily
ORTHO03D025100
(5 genes in 5 species)
specific family

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Descriptions

Description (AnnoMine)
CHD3-type chromatin-remodeling factor PICKLE
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameEucgr.E04303
idPAC:23580567

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Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004386IEAInterProhelicase activity
GO:0003676IEAInterPronucleic acid binding
GO:0003677IEAInterProDNA binding
GO:0005524IEAInterProATP binding
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03D000113
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03D000113
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03D000113
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000113
GO:0043167IEAPLAZA Homologyion bindingHOM03D000113
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03D000113
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03D000113
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03D000113
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03D000113
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D000113
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03D000113
GO:0000166IEAPLAZA Homologynucleotide bindingHOM03D000113
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03D000113
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03D000113
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000113
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03D000113
GO:0017111IEAPLAZA Homologynucleoside-triphosphatase activityHOM03D000113
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03D000113
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03D000113
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000113
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000113
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03D000113
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03D000113

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT5G44800

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001650Helicase, C-terminal
IPR000330SNF2-related
IPR000953Chromo domain/shadow
IPR016197Chromo domain-like
IPR017877Myb-like domain
IPR023780Chromo domain
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR009463Domain of unknown function DUF1087
IPR009057Homeodomain-like
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
27.3.44RNA.regulation of transcription.Chromatin Remodeling Factors
No SignalP domains detected for this gene.