Gene: EG0004G18240 (Eucalyptus grandis)

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Gene Identifier
EG0004G18240
Transcript Identifier
EG0004G18240.1
Gene Type
Coding gene
Location
scaffold_4 : 36351869-36354635 : negative

Family

Gene family
HOM03D001225
(125 genes in 31 species)
specific family
Subfamily
ORTHO03D003532
(37 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Syntaxin-22
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameEucgr.D02218
idPAC:23576069

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016192IEAInterProvesicle-mediated transport
GO:0006886IEAInterProintracellular protein transport
GO:0070727IEAPLAZA Homologycellular macromolecule localizationHOM03D001225
GO:0006891ISOPLAZA Integrative Orthologyintra-Golgi vesicle-mediated transportAT1G32270
GO:0009660ISOPLAZA Integrative Orthologyamyloplast organizationAT5G46860
GO:0010118ISOPLAZA Integrative Orthologystomatal movementAT5G46860
GO:0009959ISOPLAZA Integrative Orthologynegative gravitropismAT5G46860
GO:0007033ISOPLAZA Integrative Orthologyvacuole organizationAT5G46860

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0005484IEAInterProSNAP receptor activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAInterPromembrane
GO:0016021ISOPLAZA Integrative Orthologyintegral to membraneAT1G32270
GO:0005774ISOPLAZA Integrative Orthologyvacuolar membraneAT4G17730
GO:0005770ISOPLAZA Integrative Orthologylate endosomeAT5G46860
GO:0030140ISOPLAZA Integrative Orthologytrans-Golgi network transport vesicleAT5G46860
GO:0005773ISOPLAZA Integrative OrthologyvacuoleAT5G46860
GO:0000325ISOPLAZA Integrative Orthologyplant-type vacuoleAT5G46860
GO:0009705ISOPLAZA Integrative Orthologyplant-type vacuole membraneAT5G46860

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR010989t-SNARE
IPR000727Target SNARE coiled-coil domain
IPR006011Syntaxin, N-terminal domain
IPR006012Syntaxin/epimorphin, conserved site

Mapman id Description
31.4cell.vesicle transport
No SignalP domains detected for this gene.