Gene: EG0002G15430 (Eucalyptus grandis)

Overview top

Gene Identifier
EG0002G15430
Transcript Identifier
EG0002G15430.1
Gene Type
Coding gene
Location
scaffold_2 : 36493031-36493513 : positive

Family

Gene family
HOM03D000218
(474 genes in 31 species)
specific family
Subfamily
ORTHO03D009714
(27 genes in 22 species)
specific family

Loading...please wait

Descriptions

Description (AnnoMine)
transcription factor Y subunit B
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameEucgr.B01940
idPAC:23567046

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355ISOPLAZA Integrative Orthologyregulation of transcription, DNA-dependentAT1G09030
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03D000218
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03D000218
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000218
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03D000218
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03D000218
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000218
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000218
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03D000218
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03D000218
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000218
GO:0006351IEAPLAZA Homologytranscription, DNA-templatedHOM03D000218
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03D000218
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000218
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03D000218
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000218
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03D000218

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0043565IEAInterProsequence-specific DNA binding
GO:0046982IEAInterProprotein heterodimerization activity
GO:0003677IEAInterProDNA binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT1G09030
GO:0046983IEAPLAZA Homologyprotein dimerization activityHOM03D000218
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000218
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000218
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000218

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAInterProintracellular
GO:0044464IEAPLAZA Homologycell partHOM03D000218
GO:0005634IEAPLAZA HomologynucleusHOM03D000218
GO:0005623IEAPLAZA HomologycellHOM03D000218

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003957Transcription factor, NFYB/HAP3 subunit
IPR003958Transcription factor CBF/NF-Y/archaeal histone
IPR009072Histone-fold

Mapman id Description
27.3.15RNA.regulation of transcription.CCAAT box binding factor family, HAP3
No SignalP domains detected for this gene.
DatabaseType
PlantTFDBNF-YB