Gene: EG0001G16040 (Eucalyptus grandis)

Overview top

Gene Identifier
EG0001G16040
Transcript Identifier
EG0001G16040.1
Gene Type
Coding gene
Location
scaffold_1 : 29950666-29953528 : negative

Family

Gene family
HOM03D000022
(2181 genes in 31 species)
specific family
Subfamily
ORTHO03D000967
(61 genes in 28 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
metalloprotease FTSH
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameEucgr.A01933
idPAC:23563745

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006508IEAInterProproteolysis
GO:0010206ISOPLAZA Integrative Orthologyphotosystem II repairAT2G30950
GO:0072593ISOPLAZA Integrative Orthologyreactive oxygen species metabolic processAT2G30950
GO:0030163ISOPLAZA Integrative Orthologyprotein catabolic processAT2G30950
GO:0010304ISOPLAZA Integrative OrthologyPSII associated light-harvesting complex II catabolic processAT2G30950 AT1G06430
GO:0010205ISOPLAZA Integrative OrthologyphotoinhibitionAT2G30950
GO:0010027ISOPLAZA Integrative Orthologythylakoid membrane organizationAT2G30950

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0017111IEAInterPronucleoside-triphosphatase activity
GO:0000166IEAInterPronucleotide binding
GO:0004222IEAInterPrometalloendopeptidase activity
GO:0005524IEAInterProATP binding
GO:0032555IEAPLAZA Homologypurine ribonucleotide bindingHOM03D000022
GO:0016817IEAPLAZA Homologyhydrolase activity, acting on acid anhydridesHOM03D000022
GO:0032553IEAPLAZA Homologyribonucleotide bindingHOM03D000022
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000022
GO:0043167IEAPLAZA Homologyion bindingHOM03D000022
GO:0035639IEAPLAZA Homologypurine ribonucleoside triphosphate bindingHOM03D000022
GO:0097367IEAPLAZA Homologycarbohydrate derivative bindingHOM03D000022
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000022
GO:0016818IEAPLAZA Homologyhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesHOM03D000022
GO:0032559IEAPLAZA Homologyadenyl ribonucleotide bindingHOM03D000022
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D000022
GO:0016462IEAPLAZA Homologypyrophosphatase activityHOM03D000022
GO:0030554IEAPLAZA Homologyadenyl nucleotide bindingHOM03D000022
GO:0001882IEAPLAZA Homologynucleoside bindingHOM03D000022
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000022
GO:0017076IEAPLAZA Homologypurine nucleotide bindingHOM03D000022
GO:0036094IEAPLAZA Homologysmall molecule bindingHOM03D000022
GO:0032549IEAPLAZA Homologyribonucleoside bindingHOM03D000022
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000022
GO:0005488IEAPLAZA HomologybindingHOM03D000022
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000022
GO:0001883IEAPLAZA Homologypurine nucleoside bindingHOM03D000022
GO:0032550IEAPLAZA Homologypurine ribonucleoside bindingHOM03D000022

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAInterPromembrane
GO:0009534ISOPLAZA Integrative Orthologychloroplast thylakoidAT2G30950 AT1G06430
GO:0009579ISOPLAZA Integrative OrthologythylakoidAT2G30950 AT1G06430
GO:0031977ISOPLAZA Integrative Orthologythylakoid lumenAT2G30950
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT2G30950 AT1G06430
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT2G30950 AT1G06430
GO:0009535ISOPLAZA Integrative Orthologychloroplast thylakoid membraneAT2G30950 AT1G06430

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005936Peptidase, FtsH
IPR003960ATPase, AAA-type, conserved site
IPR003959ATPase, AAA-type, core
IPR003593AAA+ ATPase domain
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR000642Peptidase M41

Mapman id Description
29.5.7protein.degradation.metalloprotease
No SignalP domains detected for this gene.