Gene: CS00239G00010 (Citrus sinensis)

Overview top

Gene Identifier
CS00239G00010
Transcript Identifier
CS00239G00010.1
Gene Type
Coding gene
Location
scaffold00239 : 8093-11125 : negative

Family

Gene family
HOM03D005890
(37 genes in 31 species)
specific family

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Descriptions

Description (AnnoMine)
transcription factor IIH subunit 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidorange1.1g014440m
idPAC:18117001

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281IEAGenome ProjectDNA repair
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0006289IEAInterPronucleotide-excision repair
GO:0006351IEAInterProtranscription, DNA-templated
GO:0006357ISOPLAZA Integrative Orthologyregulation of transcription from RNA polymerase II promoterAT1G05055

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAGenome Projectzinc ion binding
GO:0046872IEAInterPrometal ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus
GO:0000439IEAInterProcore TFIIH complex
GO:0005675ISOPLAZA Integrative Orthologyholo TFIIH complexAT1G05055
GO:0000441IEAPLAZA HomologySSL2-core TFIIH complexHOM03D005890
GO:0032806IEAPLAZA Homologycarboxy-terminal domain protein kinase complexHOM03D005890

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012170TFIIH subunit Ssl1/p44
IPR004595TFIIH C1-like domain
IPR007198Ssl1-like
IPR007087Zinc finger, C2H2
IPR002035von Willebrand factor, type A

Mapman id Description
27.3.99RNA.regulation of transcription.unclassified
No SignalP domains detected for this gene.