Gene: CS00238G00120 (Citrus sinensis)

Overview top

Gene Identifier
CS00238G00120
Transcript Identifier
CS00238G00120.1
Gene Type
Coding gene
Location
scaffold00238 : 104228-107684 : positive

Family

Gene family
HOM03D005068
(41 genes in 27 species)
specific family

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Descriptions

Description (AnnoMine)
Chromo domain protein LHP1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidorange1.1g042818m
idPAC:18110911

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0048364ISOPLAZA Integrative Orthologyroot developmentAT5G17690
GO:0009910ISOPLAZA Integrative Orthologynegative regulation of flower developmentAT5G17690
GO:0010016ISOPLAZA Integrative Orthologyshoot system morphogenesisAT5G17690
GO:0009825ISOPLAZA Integrative Orthologymultidimensional cell growthAT5G17690
GO:0045857ISOPLAZA Integrative Orthologynegative regulation of molecular function, epigeneticAT5G17690
GO:0009648ISOPLAZA Integrative OrthologyphotoperiodismAT5G17690
GO:0048573ISOPLAZA Integrative Orthologyphotoperiodism, floweringAT5G17690
GO:0045814ISOPLAZA Integrative Orthologynegative regulation of gene expression, epigeneticAT5G17690
GO:0010048ISOPLAZA Integrative Orthologyvernalization responseAT5G17690
GO:0006342ISOPLAZA Integrative Orthologychromatin silencingAT5G17690
GO:0006325ISOPLAZA Integrative Orthologychromatin organizationAT5G17690

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003935ISOPLAZA Integrative OrthologyGTP cyclohydrolase II activityAT5G17690
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G17690
GO:0035064ISOPLAZA Integrative Orthologymethylated histone residue bindingAT5G17690
GO:0003677ISOPLAZA Integrative OrthologyDNA bindingAT5G17690

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G17690
GO:0005720ISOPLAZA Integrative Orthologynuclear heterochromatinAT5G17690
GO:0000791ISOPLAZA Integrative OrthologyeuchromatinAT5G17690

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000953Chromo domain/shadow
IPR023780Chromo domain
IPR023779Chromo domain, conserved site
IPR016197Chromo domain-like
IPR017984Chromo domain subgroup
IPR008251Chromo shadow domain

Mapman id Description
28.1DNA.synthesis/chromatin structure
No SignalP domains detected for this gene.