PLAZA 3.0 Dicots gene overview : CS00103G00400

Gene: CS00103G00400 (Citrus sinensis)

Overview

Gene Identifier: CS00103G00400
Transcript Identifier: CS00103G00400.1
Gene Type: Coding gene
Location: scaffold00103 : 235298-237251 : positive

Family

Gene family: HOM03D000145
(721 genes in 30 species)
specific family
Subfamily: ORTHO03D018434
(8 genes in 7 species)
specific family

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Descriptions

Description (AnnoMine): Probable 3-ketoacyl-CoA synthase 20

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	orange1.1g014606m
id	PAC:18134762

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006633	IEA	Genome Project	fatty acid biosynthetic process
GO:0008610	IEA	Genome Project	lipid biosynthetic process
GO:0008152	IEA	InterPro	metabolic process
GO:0042335	ISO	PLAZA Tree-based Orthology	cuticle development	AT1G71160
GO:0000038	ISO	PLAZA Tree-based Orthology	very long-chain fatty acid metabolic process	AT1G71160
GO:0006629	IEA	PLAZA Homology	lipid metabolic process	HOM03D000145
GO:1901576	IEA	PLAZA Homology	organic substance biosynthetic process	HOM03D000145
GO:0044763	IEA	PLAZA Homology	single-organism cellular process	HOM03D000145
GO:0044283	IEA	PLAZA Homology	small molecule biosynthetic process	HOM03D000145
GO:0043436	IEA	PLAZA Homology	oxoacid metabolic process	HOM03D000145
GO:0044281	IEA	PLAZA Homology	small molecule metabolic process	HOM03D000145
GO:0032787	IEA	PLAZA Homology	monocarboxylic acid metabolic process	HOM03D000145
GO:0016053	IEA	PLAZA Homology	organic acid biosynthetic process	HOM03D000145
GO:0044710	IEA	PLAZA Homology	single-organism metabolic process	HOM03D000145
GO:0044711	IEA	PLAZA Homology	single-organism biosynthetic process	HOM03D000145
GO:0006631	IEA	PLAZA Homology	fatty acid metabolic process	HOM03D000145
GO:0044237	IEA	PLAZA Homology	cellular metabolic process	HOM03D000145
GO:0044255	IEA	PLAZA Homology	cellular lipid metabolic process	HOM03D000145
GO:0044238	IEA	PLAZA Homology	primary metabolic process	HOM03D000145
GO:0009058	IEA	PLAZA Homology	biosynthetic process	HOM03D000145
GO:0009987	IEA	PLAZA Homology	cellular process	HOM03D000145
GO:0044699	IEA	PLAZA Homology	single-organism process	HOM03D000145
GO:0006082	IEA	PLAZA Homology	organic acid metabolic process	HOM03D000145
GO:0072330	IEA	PLAZA Homology	monocarboxylic acid biosynthetic process	HOM03D000145
GO:0071704	IEA	PLAZA Homology	organic substance metabolic process	HOM03D000145
GO:0046394	IEA	PLAZA Homology	carboxylic acid biosynthetic process	HOM03D000145
GO:0044249	IEA	PLAZA Homology	cellular biosynthetic process	HOM03D000145
GO:0019752	IEA	PLAZA Homology	carboxylic acid metabolic process	HOM03D000145

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016747	IEA	Genome Project	transferase activity, transferring acyl groups other than amino-acyl groups
GO:0003824	IEA	InterPro	catalytic activity
GO:0016746	IEA	PLAZA Homology	transferase activity, transferring acyl groups	HOM03D000145
GO:0016740	IEA	PLAZA Homology	transferase activity	HOM03D000145

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0016020	IEA	Genome Project	membrane

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR016038	Thiolase-like, subgroup
IPR016039	Thiolase-like
IPR013601	FAE1/Type III polyketide synthase-like protein
IPR013747	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal

Mapman id	Description
11.1.10	lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase

No SignalP domains detected for this gene.