Gene: CS00053G00480 (Citrus sinensis)

Overview top

Gene Identifier
CS00053G00480
Transcript Identifier
CS00053G00480.1
Gene Type
Coding gene
Location
scaffold00053 : 390460-397290 : negative

Family

Gene family
HOM03D001110
(138 genes in 31 species)
specific family
Subfamily
ORTHO03D010964
(24 genes in 20 species)
specific family

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Descriptions

Description (AnnoMine)
Asparagine--tRNA ligase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidorange1.1g011197m
idPAC:18094339

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006418IEAGenome ProjecttRNA aminoacylation for protein translation
GO:0006412IEAGenome Projecttranslation
GO:0006421IEAInterProasparaginyl-tRNA aminoacylation
GO:0048481ISOPLAZA Integrative Orthologyovule developmentAT4G17300
GO:0043038IEAPLAZA Homologyamino acid activationHOM03D001110
GO:0043039IEAPLAZA HomologytRNA aminoacylationHOM03D001110

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAGenome Projectnucleotide binding
GO:0004812IEAGenome Projectaminoacyl-tRNA ligase activity
GO:0005524IEAGenome ProjectATP binding
GO:0003676IEAGenome Projectnucleic acid binding
GO:0004816IEAInterProasparagine-tRNA ligase activity
GO:0016875IEAPLAZA Homologyligase activity, forming carbon-oxygen bondsHOM03D001110
GO:0016876IEAPLAZA Homologyligase activity, forming aminoacyl-tRNA and related compoundsHOM03D001110

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAGenome Projectcytoplasm
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT4G17300
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT4G17300
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT4G17300

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002312Aspartyl/Asparaginyl-tRNA synthetase, class IIb
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR004522Asparagine-tRNA ligase
IPR006195Aminoacyl-tRNA synthetase, class II
IPR012340Nucleic acid-binding, OB-fold
IPR018150Aminoacyl-tRNA synthetase, class II (D/K/N)-like
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

Mapman id Description
29.1.22protein.aa activation.asparagine-tRNA ligase
No SignalP domains detected for this gene.