Gene: CRU_007G27480 (Capsella rubella)

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Gene Identifier
CRU_007G27480
Transcript Identifier
CRU_007G27480.1
Gene Type
Coding gene
Location
scaffold_7 : 10973200-10978573 : positive

Family

Gene family
HOM03D001051
(143 genes in 31 species)
specific family
Subfamily
ORTHO03D005692
(33 genes in 26 species)
specific family

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Descriptions

Description (AnnoMine)
Methionine--tRNA ligase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10004167m.g
idPAC:20894386

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006418IEAGenome ProjecttRNA aminoacylation for protein translation
GO:0006412IEAGenome Projecttranslation
GO:0006431IEAInterPromethionyl-tRNA aminoacylation
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT4G13780

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000049IEAGenome ProjecttRNA binding
GO:0000166IEAGenome Projectnucleotide binding
GO:0004812IEAGenome Projectaminoacyl-tRNA ligase activity
GO:0005524IEAGenome ProjectATP binding
GO:0004825IEAInterPromethionine-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAGenome Projectcytoplasm
GO:0005829ISOPLAZA Integrative OrthologycytosolAT4G13780

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014758Methionyl-tRNA synthetase
IPR002547tRNA-binding domain
IPR001412Aminoacyl-tRNA synthetase, class I, conserved site
IPR009080Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR012340Nucleic acid-binding, OB-fold
IPR015413Methionyl/Leucyl tRNA synthetase
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR023458Methionine-tRNA ligase, type 1
IPR013155Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding

Mapman id Description
29.1.10protein.aa activation.methionine-tRNA ligase
No SignalP domains detected for this gene.