Gene: CRU_007G15070 (Capsella rubella)

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Gene Identifier
CRU_007G15070
Transcript Identifier
CRU_007G15070.1
Gene Type
Coding gene
Location
scaffold_7 : 5923489-5925344 : positive

Family

Gene family
HOM03D001792
(93 genes in 30 species)
specific family
Subfamily
ORTHO03D026575
(5 genes in 5 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
dismutase [Fe] 1, chloroplastic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10005448m.g
idPAC:20893945

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006801IEAGenome Projectsuperoxide metabolic process
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0019430ISOPLAZA Integrative Orthologyremoval of superoxide radicalsAT5G23310 AT4G25100
GO:0010193ISOPLAZA Integrative Orthologyresponse to ozoneAT4G25100
GO:0009642ISOPLAZA Integrative Orthologyresponse to light intensityAT4G25100
GO:0007623ISOPLAZA Integrative Orthologycircadian rhythmAT4G25100
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT4G25100
GO:0046688ISOPLAZA Integrative Orthologyresponse to copper ionAT4G25100
GO:0006979ISOPLAZA Integrative Orthologyresponse to oxidative stressAT4G25100

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004784IEAGenome Projectsuperoxide dismutase activity
GO:0046872IEAGenome Projectmetal ion binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G23310 AT4G25100
GO:0005507ISOPLAZA Integrative Orthologycopper ion bindingAT4G25100
GO:0016721IEAPLAZA Homologyoxidoreductase activity, acting on superoxide radicals as acceptorHOM03D001792

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0042646ISOPLAZA Integrative Orthologyplastid nucleoidAT5G23310
GO:0042644ISOPLAZA Integrative Orthologychloroplast nucleoidAT5G23310
GO:0009579ISOPLAZA Integrative OrthologythylakoidAT5G23310 AT4G25100
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G23310 AT4G25100
GO:0009295ISOPLAZA Integrative OrthologynucleoidAT5G23310
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT4G25100
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT4G25100
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT4G25100
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT4G25100
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT4G25100

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001189Manganese/iron superoxide dismutase
IPR019832Manganese/iron superoxide dismutase, C-terminal
IPR019833Manganese/iron superoxide dismutase, binding site
IPR019831Manganese/iron superoxide dismutase, N-terminal

Mapman id Description
21.6redox.dismutases and catalases
No SignalP domains detected for this gene.