Gene: CRU_007G09450 (Capsella rubella)

Overview top

Gene Identifier
CRU_007G09450
Transcript Identifier
CRU_007G09450.1
Gene Type
Coding gene
Location
scaffold_7 : 3771894-3774373 : positive

Family

Gene family
HOM03D002360
(75 genes in 31 species)
specific family
Subfamily
ORTHO03D001886
(45 genes in 26 species)
specific family

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Descriptions

Description (AnnoMine)
Aspartate--tRNA ligase, cytoplasmic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10004480m.g
idPAC:20895300

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006418IEAGenome ProjecttRNA aminoacylation for protein translation
GO:0006412IEAGenome Projecttranslation
GO:0006422IEAInterProaspartyl-tRNA aminoacylation
GO:0046686ISOPLAZA Tree-based Orthologyresponse to cadmium ionAT4G31180 AT4G26870

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAGenome Projectnucleotide binding
GO:0004812IEAGenome Projectaminoacyl-tRNA ligase activity
GO:0005524IEAGenome ProjectATP binding
GO:0003676IEAGenome Projectnucleic acid binding
GO:0004815IEAInterProaspartate-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAGenome Projectcytoplasm
GO:0009506ISOPLAZA Tree-based OrthologyplasmodesmaAT4G26870
GO:0005829ISOPLAZA Tree-based OrthologycytosolAT4G31180 AT4G26870

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR018150Aminoacyl-tRNA synthetase, class II (D/K/N)-like
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR002312Aspartyl/Asparaginyl-tRNA synthetase, class IIb
IPR012340Nucleic acid-binding, OB-fold
IPR006195Aminoacyl-tRNA synthetase, class II
IPR004523Aspartyl-tRNA synthetases
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

Mapman id Description
29.1.12protein.aa activation.aspartate-tRNA ligase
No SignalP domains detected for this gene.