Gene: CRU_006G28830 (Capsella rubella)

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Gene Identifier
CRU_006G28830
Transcript Identifier
CRU_006G28830.1
Gene Type
Coding gene
Location
scaffold_6 : 13559901-13565163 : positive

Family

Gene family
HOM03D000613
(221 genes in 31 species)
specific family
Subfamily
ORTHO03D018356
(8 genes in 7 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Protein SUPPRESSOR OF PHYA-105 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10000091m.g
idPAC:20909648

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006468IEAGenome Projectprotein phosphorylation
GO:0009585ISOPLAZA Tree-based Orthologyred, far-red light phototransductionAT2G46340
GO:0009658ISOPLAZA Tree-based Orthologychloroplast organizationAT2G46340
GO:0010218ISOPLAZA Tree-based Orthologyresponse to far red lightAT2G46340
GO:0010114ISOPLAZA Tree-based Orthologyresponse to red lightAT2G46340
GO:2000028ISOPLAZA Tree-based Orthologyregulation of photoperiodism, floweringAT2G46340
GO:0010100ISOPLAZA Tree-based Orthologynegative regulation of photomorphogenesisAT2G46340
GO:0048575ISOPLAZA Tree-based Orthologyshort-day photoperiodism, floweringAT2G46340

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004672IEAGenome Projectprotein kinase activity
GO:0005524IEAGenome ProjectATP binding
GO:0005515IEAGenome Projectprotein binding
GO:0016772IEAInterProtransferase activity, transferring phosphorus-containing groups
GO:0042802ISOPLAZA Tree-based Orthologyidentical protein bindingAT2G46340
GO:0043167IEAPLAZA Homologyion bindingHOM03D000613
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000613

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Tree-based OrthologynucleusAT2G46340

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001680WD40 repeat
IPR019775WD40 repeat, conserved site
IPR015943WD40/YVTN repeat-like-containing domain
IPR017986WD40-repeat-containing domain
IPR020472G-protein beta WD-40 repeat
IPR000719Protein kinase domain
IPR011009Protein kinase-like domain

Mapman id Description
30.11signalling.light
No SignalP domains detected for this gene.