Gene: CRU_006G27890 (Capsella rubella)

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Gene Identifier
CRU_006G27890
Transcript Identifier
CRU_006G27890.1
Gene Type
Coding gene
Location
scaffold_6 : 13110838-13112138 : positive

Family

Gene family
HOM03D000132
(752 genes in 31 species)
specific family
Subfamily
ORTHO03D004697
(35 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
b binding protein of LHCII type I, chloroplastic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10001659m.g
idPAC:20908750

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009765IEAGenome Projectphotosynthesis, light harvesting
GO:0015979ISOPLAZA Integrative OrthologyphotosynthesisAT4G10340
GO:0009987IEAPLAZA Homologycellular processHOM03D000132
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000132
GO:0006091IEAPLAZA Homologygeneration of precursor metabolites and energyHOM03D000132
GO:0019684IEAPLAZA Homologyphotosynthesis, light reactionHOM03D000132
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000132
GO:0010196ISOPLAZA Integrative Orthologynonphotochemical quenchingAT4G10340
GO:0009637ISOPLAZA Integrative Orthologyresponse to blue lightAT4G10340
GO:0010114ISOPLAZA Integrative Orthologyresponse to red lightAT4G10340
GO:0010218ISOPLAZA Integrative Orthologyresponse to far red lightAT4G10340

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAGenome Projectmembrane
GO:0009533ISOPLAZA Integrative Orthologychloroplast stromal thylakoidAT4G10340
GO:0009783ISOPLAZA Integrative Orthologyphotosystem II antenna complexAT4G10340
GO:0009535ISOPLAZA Integrative Orthologychloroplast thylakoid membraneAT4G10340
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT4G10340
GO:0010287ISOPLAZA Integrative OrthologyplastoglobuleAT4G10340
GO:0009579ISOPLAZA Integrative OrthologythylakoidAT4G10340
GO:0009534ISOPLAZA Integrative Orthologychloroplast thylakoidAT4G10340
GO:0009517ISOPLAZA Integrative OrthologyPSII associated light-harvesting complex IIAT4G10340

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023329Chlorophyll a/b binding protein domain
IPR022796Chlorophyll A-B binding protein
IPR001344Chlorophyll A-B binding protein, plant

Mapman id Description
1.1.1.1PS.lightreaction.photosystem II.LHC-II
No SignalP domains detected for this gene.