Gene: CRU_006G20730 (Capsella rubella)

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Gene Identifier
CRU_006G20730
Transcript Identifier
CRU_006G20730.1
Gene Type
Coding gene
Location
scaffold_6 : 8009919-8016787 : negative

Family

Gene family
HOM03D003639
(50 genes in 31 species)
specific family
Subfamily
ORTHO03D013536
(17 genes in 17 species)
specific family

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Descriptions

Description (AnnoMine)
Probable cation-transporting ATPase C10C6.6
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10003513m.g
idPAC:20907396

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152IEAGenome Projectmetabolic process
GO:0006812IEAInterProcation transport
GO:0016036ISOPLAZA Integrative Orthologycellular response to phosphate starvationAT5G23630
GO:0048867ISOPLAZA Integrative Orthologystem cell fate determinationAT5G23630
GO:0010073ISOPLAZA Integrative Orthologymeristem maintenanceAT5G23630
GO:0010152ISOPLAZA Integrative Orthologypollen maturationAT5G23630
GO:0009846ISOPLAZA Integrative Orthologypollen germinationAT5G23630
GO:0006875ISOPLAZA Integrative Orthologycellular metal ion homeostasisAT5G23630

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAGenome Projectnucleotide binding
GO:0046872IEAGenome Projectmetal ion binding
GO:0003824IEAGenome Projectcatalytic activity
GO:0019829IEAInterProcation-transporting ATPase activity
GO:0016887IEAInterProATPase activity
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D003639

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021IEAInterProintegral to membrane
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT5G23630
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT5G23630

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023299P-type ATPase, cytoplasmic domain N
IPR008250P-type ATPase, A domain
IPR006544Cation-transporting P-type ATPase, subfamily V
IPR023214HAD-like domain
IPR001757Cation-transporting P-type ATPase
IPR018303P-type ATPase, phosphorylation site

Mapman id Description
34.14transport.unspecified cations
No SignalP domains detected for this gene.