Gene: CRU_006G14340 (Capsella rubella)

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Gene Identifier
CRU_006G14340
Transcript Identifier
CRU_006G14340.1
Gene Type
Coding gene
Location
scaffold_6 : 5436085-5437131 : positive

Family

Gene family
HOM03D000730
(191 genes in 29 species)
specific family
Subfamily
ORTHO03D007386
(31 genes in 25 species)
specific family

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Descriptions

Description (AnnoMine)
Probable UDP-arabinopyranose mutase 5
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10002568m.g
idPAC:20908438

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0071555IEAGenome Projectcell wall organization
GO:0030244IEAGenome Projectcellulose biosynthetic process
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT5G16510
GO:0051274IEAPLAZA Homologybeta-glucan biosynthetic processHOM03D000730
GO:0051273IEAPLAZA Homologybeta-glucan metabolic processHOM03D000730
GO:0044264IEAPLAZA Homologycellular polysaccharide metabolic processHOM03D000730
GO:0044262IEAPLAZA Homologycellular carbohydrate metabolic processHOM03D000730
GO:0006073IEAPLAZA Homologycellular glucan metabolic processHOM03D000730
GO:0016051IEAPLAZA Homologycarbohydrate biosynthetic processHOM03D000730
GO:0033692IEAPLAZA Homologycellular polysaccharide biosynthetic processHOM03D000730
GO:0005976IEAPLAZA Homologypolysaccharide metabolic processHOM03D000730
GO:0044723IEAPLAZA Homologysingle-organism carbohydrate metabolic processHOM03D000730
GO:0034637IEAPLAZA Homologycellular carbohydrate biosynthetic processHOM03D000730
GO:0009250IEAPLAZA Homologyglucan biosynthetic processHOM03D000730
GO:0030243IEAPLAZA Homologycellulose metabolic processHOM03D000730
GO:0044042IEAPLAZA Homologyglucan metabolic processHOM03D000730
GO:0000271IEAPLAZA Homologypolysaccharide biosynthetic processHOM03D000730

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008466IEAGenome Projectglycogenin glucosyltransferase activity
GO:0016758IEAGenome Projecttransferase activity, transferring hexosyl groups
GO:0016866IEAInterProintramolecular transferase activity
GO:0052691ISOPLAZA Integrative OrthologyUDP-arabinopyranose mutase activityAT5G16510
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G16510
GO:0016853IEAPLAZA Homologyisomerase activityHOM03D000730

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005618IEAGenome Projectcell wall
GO:0030054IEAGenome Projectcell junction
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT5G16510
GO:0005794ISOPLAZA Integrative OrthologyGolgi apparatusAT5G16510
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G16510

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004901Reversibly glycosylated polypeptide family

Mapman id Description
10.5.5cell wall.cell wall proteins.RGP
No SignalP domains detected for this gene.