Gene: CRU_006G08960 (Capsella rubella)

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Gene Identifier
CRU_006G08960
Transcript Identifier
CRU_006G08960.1
Gene Type
Coding gene
Location
scaffold_6 : 3338396-3342122 : positive

Family

Gene family
HOM03D000402
(311 genes in 31 species)
specific family
Subfamily
ORTHO03D023454
(5 genes in 4 species)
specific family

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Descriptions

Description (AnnoMine)
Osmosensing histidine protein kinase SLN1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10003739m.g
idPAC:20910717

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000160IEAGenome Projectphosphorelay signal transduction system
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0007165IEAGenome Projectsignal transduction
GO:0016310IEAInterProphosphorylation
GO:0090333ISOPLAZA Integrative Orthologyregulation of stomatal closureAT5G10720
GO:0071732ISOPLAZA Integrative Orthologycellular response to nitric oxideAT5G10720
GO:0071219ISOPLAZA Integrative Orthologycellular response to molecule of bacterial originAT5G10720
GO:0070301ISOPLAZA Integrative Orthologycellular response to hydrogen peroxideAT5G10720
GO:0048364ISOPLAZA Integrative Orthologyroot developmentAT5G10720
GO:0009788ISOPLAZA Integrative Orthologynegative regulation of abscisic acid-activated signaling pathwayAT5G10720
GO:0010105ISOPLAZA Integrative Orthologynegative regulation of ethylene mediated signaling pathwayAT5G10720
GO:0009736ISOPLAZA Integrative Orthologycytokinin-activated signaling pathwayAT5G10720
GO:0051716IEAPLAZA Homologycellular response to stimulusHOM03D000402
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000402
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000402
GO:0023052IEAPLAZA HomologysignalingHOM03D000402
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000402
GO:0007154IEAPLAZA Homologycell communicationHOM03D000402
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000402
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000402
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000402
GO:0044700IEAPLAZA Homologysingle organism signalingHOM03D000402
GO:0050896IEAPLAZA Homologyresponse to stimulusHOM03D000402

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000156IEAGenome Projectphosphorelay response regulator activity
GO:0000155IEAGenome Projectphosphorelay sensor kinase activity
GO:0005524IEAGenome ProjectATP binding
GO:0004871IEAInterProsignal transducer activity
GO:0016772IEAInterProtransferase activity, transferring phosphorus-containing groups
GO:0004673ISOPLAZA Integrative Orthologyprotein histidine kinase activityAT5G10720
GO:0060089IEAPLAZA Homologymolecular transducer activityHOM03D000402
GO:0016775IEAPLAZA Homologyphosphotransferase activity, nitrogenous group as acceptorHOM03D000402
GO:0038023IEAPLAZA Homologysignaling receptor activityHOM03D000402
GO:0004872IEAPLAZA Homologyreceptor activityHOM03D000402

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAGenome Projectmembrane
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT5G10720
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT5G10720
GO:0005773ISOPLAZA Integrative OrthologyvacuoleAT5G10720

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004358Signal transduction histidine kinase-related protein, C-terminal
IPR003594Histidine kinase-like ATPase, ATP-binding domain
IPR011006CheY-like superfamily
IPR001789Signal transduction response regulator, receiver domain
IPR009082Signal transduction histidine kinase, homodimeric domain
IPR003661Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain
IPR005467Signal transduction histidine kinase, core
IPR000014PAS domain

Mapman id Description
17.4.2hormone metabolism.cytokinin.signal transduction
No SignalP domains detected for this gene.