Gene: CRU_006G00180 (Capsella rubella)

Overview top

Gene Identifier
CRU_006G00180
Transcript Identifier
CRU_006G00180.1
Gene Type
Coding gene
Location
scaffold_6 : 71421-77392 : positive

Family

Gene family
HOM03D004976
(41 genes in 29 species)
specific family
Subfamily
ORTHO03D016728
(10 genes in 9 species)
specific family

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Descriptions

Description (AnnoMine)
cancer type 2 susceptibility protein
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10003335m.g
idPAC:20910347

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006302IEAGenome Projectdouble-strand break repair
GO:0000724IEAGenome Projectdouble-strand break repair via homologous recombination
GO:0006310IEAGenome ProjectDNA recombination
GO:0006281IEAInterProDNA repair
GO:0031347ISOPLAZA Integrative Orthologyregulation of defense responseAT4G00020
GO:0048314ISOPLAZA Integrative Orthologyembryo sac morphogenesisAT4G00020
GO:0006355ISOPLAZA Integrative Orthologyregulation of transcription, DNA-dependentAT4G00020
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT4G00020
GO:0009553ISOPLAZA Integrative Orthologyembryo sac developmentAT4G00020
GO:0000725IEAPLAZA Homologyrecombinational repairHOM03D004976

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAGenome Projectprotein binding
GO:0003697IEAGenome Projectsingle-stranded DNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT5G01630

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002093BRCA2 repeat
IPR015252DNA recombination/repair protein BRCA2, helical domain
IPR012340Nucleic acid-binding, OB-fold
IPR015187BRCA2, oligonucleotide/oligosaccharide-binding 1
IPR015525Breast cancer type 2 susceptibility protein

Mapman id Description
35.1not assigned.no ontology
No SignalP domains detected for this gene.