Gene: CRU_005G24120 (Capsella rubella)

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Gene Identifier
CRU_005G24120
Transcript Identifier
CRU_005G24120.1
Gene Type
Coding gene
Location
scaffold_5 : 11993123-11994445 : positive

Family

Gene family
HOM03D001505
(107 genes in 31 species)
specific family
Subfamily
ORTHO03D026949
(5 genes in 5 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Endothelial differentiation-related factor 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10018205m.g
idPAC:20887293

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0045893ISOPLAZA Integrative Orthologypositive regulation of transcription, DNA-dependentAT3G58680 AT2G42680

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0043565IEAGenome Projectsequence-specific DNA binding
GO:0003677IEAInterProDNA binding
GO:0003713ISOPLAZA Integrative Orthologytranscription coactivator activityAT3G58680 AT2G42680

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT3G58680 AT2G42680
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT3G58680
GO:0005634ISOPLAZA Integrative OrthologynucleusAT3G58680

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013729Multiprotein bridging factor 1, N-terminal
IPR001387Cro/C1-type helix-turn-helix domain
IPR010982Lambda repressor-like, DNA-binding domain

Mapman id Description
17.5.3hormone metabolism.ethylene.induced-regulated-responsive-activated
No SignalP domains detected for this gene.