Gene: CRU_005G23610 (Capsella rubella)

Overview top

Gene Identifier
CRU_005G23610
Transcript Identifier
CRU_005G23610.1
Gene Type
Coding gene
Location
scaffold_5 : 11819220-11821698 : negative

Family

Gene family
HOM03D003757
(49 genes in 31 species)
specific family
Subfamily
ORTHO03D003457
(38 genes in 31 species)
specific family

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Descriptions

Description (AnnoMine)
Phenylalanine--tRNA ligase alpha subunit
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10017303m.g
idPAC:20887178

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006432IEAGenome Projectphenylalanyl-tRNA aminoacylation
GO:0008033IEAGenome ProjecttRNA processing
GO:0043039IEAGenome ProjecttRNA aminoacylation
GO:0006418IEAInterProtRNA aminoacylation for protein translation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000049IEAGenome ProjecttRNA binding
GO:0000287IEAGenome Projectmagnesium ion binding
GO:0004826IEAGenome Projectphenylalanine-tRNA ligase activity
GO:0005524IEAGenome ProjectATP binding
GO:0004812IEAGenome Projectaminoacyl-tRNA ligase activity
GO:0000166IEAInterPronucleotide binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAGenome Projectcytoplasm
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT3G58140
GO:0016020ISOPLAZA Integrative OrthologymembraneAT3G58140
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT3G58140
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT3G58140

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005121Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding
IPR002319Phenylalanyl-tRNA synthetase
IPR004530Phenylalanyl-tRNA synthetase, class IIc, mitochondrial
IPR006195Aminoacyl-tRNA synthetase, class II

Mapman id Description
29.1.20protein.aa activation.phenylalanine-tRNA ligase
No SignalP domains detected for this gene.