Gene: CRU_005G22580 (Capsella rubella)

Overview top

Gene Identifier
CRU_005G22580
Transcript Identifier
CRU_005G22580.1
Gene Type
Coding gene
Location
scaffold_5 : 11400563-11402977 : positive

Family

Gene family
HOM03D001302
(119 genes in 31 species)
specific family
Subfamily
ORTHO03D000510
(81 genes in 31 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
Cysteine--tRNA ligase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10017019m.g
idPAC:20887493

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006418IEAGenome ProjecttRNA aminoacylation for protein translation
GO:0006423IEAGenome Projectcysteinyl-tRNA aminoacylation
GO:0006412IEAGenome Projecttranslation
GO:0046686ISOPLAZA Tree-based Orthologyresponse to cadmium ionAT5G38830

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAGenome Projectnucleotide binding
GO:0005524IEAGenome ProjectATP binding
GO:0004812IEAGenome Projectaminoacyl-tRNA ligase activity
GO:0004817IEAGenome Projectcysteine-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAGenome Projectcytoplasm
GO:0005829ISOPLAZA Tree-based OrthologycytosolAT5G38830

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR024909Cysteinyl-tRNA synthetase/mycothiol ligase
IPR009080Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR015803Cysteine-tRNA ligase

Mapman id Description
29.1.16protein.aa activation.cysteine-tRNA ligase
No SignalP domains detected for this gene.