Gene: CRU_005G20790 (Capsella rubella)

Overview top

Gene Identifier
CRU_005G20790
Transcript Identifier
CRU_005G20790.1
Gene Type
Coding gene
Location
scaffold_5 : 10753725-10756768 : negative

Family

Gene family
HOM03D004994
(41 genes in 30 species)
specific family
Subfamily
ORTHO03D006174
(33 genes in 27 species)
specific family

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Descriptions

Description (AnnoMine)
Methionine--tRNA ligase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10016854m.g
idPAC:20887063

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006418IEAGenome ProjecttRNA aminoacylation for protein translation
GO:0006412IEAGenome Projecttranslation
GO:0006431IEAInterPromethionyl-tRNA aminoacylation
GO:0048481ISOPLAZA Integrative Orthologyovule developmentAT3G55400

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAGenome Projectnucleotide binding
GO:0004812IEAGenome Projectaminoacyl-tRNA ligase activity
GO:0005524IEAGenome ProjectATP binding
GO:0004825IEAInterPromethionine-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAGenome Projectcytoplasm
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT3G55400
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT3G55400
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT3G55400

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023457Methionine-tRNA synthetase, type 2
IPR014758Methionyl-tRNA synthetase
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR009080Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR013155Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding
IPR015413Methionyl/Leucyl tRNA synthetase

Mapman id Description
29.1.10protein.aa activation.methionine-tRNA ligase
No SignalP domains detected for this gene.